science▌
185 indexed skills · max 10 per page
pytdc
K-Dense-AI/scientific-agent-skills · Science
### Pytdc - name: "pytdc" - description: "Therapeutics Data Commons. AI-ready drug discovery datasets (ADME, toxicity, DTI), benchmarks, scaffold splits, molecular oracles, for therapeutic ML and pharmacological prediction."
pydicom
K-Dense-AI/scientific-agent-skills · Science
### Pydicom - name: "pydicom" - description: "Python library for working with DICOM (Digital Imaging and Communications in Medicine) files. Use this skill when reading, writing, or modifying medical imaging data in DICOM format, extracting pixel ..."
nextflow
K-Dense-AI/scientific-agent-skills · Science
### Nextflow - name: "nextflow" - description: "Build, run, and debug Nextflow data pipelines and nf-core workflows end to end. Use whenever the user mentions Nextflow, nf-core, .nf files, nextflow.config, DSL2, processes/channels/operators, sample..."
networkx
K-Dense-AI/scientific-agent-skills · Science
### Networkx - name: "networkx" - description: "Comprehensive toolkit for creating, analyzing, and visualizing complex networks and graphs in Python. Use when working with network/graph data structures, analyzing relationships between entities, com..."
pptx-posters
K-Dense-AI/scientific-agent-skills · Science
### Pptx Posters - name: "pptx-posters" - description: "Create research posters using HTML/CSS that can be exported to PDF or PPTX. Use this skill ONLY when the user explicitly requests PowerPoint/PPTX poster format. For standard research posters, use late..." - allowed-tools: "Read Write Edit Bash"
pylabrobot
K-Dense-AI/scientific-agent-skills · Science
### Pylabrobot - name: "pylabrobot" - description: "Vendor-agnostic lab automation framework. Use when controlling multiple equipment types (Hamilton, Tecan, Opentrons, plate readers, pumps) or needing unified programming across different vendors. Best..."
molfeat
K-Dense-AI/scientific-agent-skills · Science
### Molfeat - name: "molfeat" - description: "Molecular featurization for ML (100+ featurizers). ECFP, MACCS, descriptors, pretrained models (ChemBERTa), convert SMILES to features, for QSAR and molecular ML." - allowed-tools: "Read Write Edit Bash"
open-notebook
K-Dense-AI/scientific-agent-skills · Science
### Open Notebook - name: "open-notebook" - description: "Self-hosted, open-source alternative to Google NotebookLM for AI-powered research and document analysis. Use when organizing research materials into notebooks, ingesting diverse content sources (PDFs,..."
neurokit2
K-Dense-AI/scientific-agent-skills · Science
### Neurokit2 - name: "neurokit2" - description: "Comprehensive biosignal processing toolkit for analyzing physiological data including ECG, EEG, EDA, RSP, PPG, EMG, and EOG signals. Use this skill when processing cardiovascular signals, brain activi..."
pymoo
K-Dense-AI/scientific-agent-skills · Science
### Pymoo - name: "pymoo" - description: "Multi-objective optimization framework. NSGA-II, NSGA-III, MOEA/D, Pareto fronts, constraint handling, benchmarks (ZDT, DTLZ), for engineering design and optimization problems." - allowed-tools: "Read Write Edit Bash"