science▌
185 indexed skills · max 10 per page
hypothesis-generation
K-Dense-AI/scientific-agent-skills · Science
### Hypothesis Generation - name: "hypothesis-generation" - description: "Structured hypothesis formulation from observations. Use when you have experimental observations or data and need to formulate testable hypotheses with predictions, propose mechanisms, and design expe..." - allowed-tools: "Read Write Edit Bash"
cirq
K-Dense-AI/scientific-agent-skills · Science
### Cirq - name: "cirq" - description: "Google quantum computing framework. Use when targeting Google Quantum AI hardware, designing noise-aware circuits, or running quantum characterization experiments. Best for Google hardware, noise mode..." - allowed-tools: "Read Write Edit Bash"
deeptools
K-Dense-AI/scientific-agent-skills · Science
### Deeptools - name: "deeptools" - description: "NGS analysis toolkit. BAM to bigWig conversion, QC (correlation, PCA, fingerprints), heatmaps/profiles (TSS, peaks), for ChIP-seq, RNA-seq, ATAC-seq visualization."
esm
K-Dense-AI/scientific-agent-skills · Science
### Esm - name: "esm" - description: "Comprehensive toolkit for EvolutionaryScale protein language models including ESM3 (generative multimodal design across sequence, structure, and function) and ESM C (efficient embeddings). Use for pro..."
hypogenic
K-Dense-AI/scientific-agent-skills · Science
### Hypogenic - name: "hypogenic" - description: "Automated LLM-driven hypothesis generation and testing on tabular datasets. Use when you want to systematically explore hypotheses about patterns in empirical data (e.g., deception detection, content ..."
dask
K-Dense-AI/scientific-agent-skills · Science
### Dask - name: "dask" - description: "Distributed computing for larger-than-RAM pandas/NumPy workflows. Use when you need to scale existing pandas/NumPy code beyond memory or across clusters. Best for parallel file processing, distributed..." - allowed-tools: "Read Write Edit Bash"
hugging-science
K-Dense-AI/scientific-agent-skills · Science
### Hugging Science - name: "hugging-science" - description: "Use when the user is doing AI/ML work in a scientific domain such as biology, chemistry, physics, astronomy, climate, genomics, materials, medicine, ecology, energy, engineering, math, drug discovery,..."
ginkgo-cloud-lab
K-Dense-AI/scientific-agent-skills · Science
### Ginkgo Cloud Lab - name: "ginkgo-cloud-lab" - description: "Submit and manage protocols on Ginkgo Bioworks Cloud Lab (cloud.ginkgo.bio), a web-based interface for autonomous lab execution on Reconfigurable Automation Carts (RACs). Use when the user wants to ru..."
depmap
K-Dense-AI/scientific-agent-skills · Science
### Depmap - name: "depmap" - description: "Query the Cancer Dependency Map (DepMap) for cancer cell line gene dependency scores (CRISPR Chronos), drug sensitivity data, and gene effect profiles. Use for identifying cancer-specific vulnerabilit..."
gtars
K-Dense-AI/scientific-agent-skills · Science
### Gtars - name: "gtars" - description: "High-performance toolkit for genomic interval analysis in Rust with Python bindings. Use when working with genomic regions, BED files, coverage tracks, overlap detection, tokenization for ML models, o..."