python▌
103 indexed skills · max 10 per page
gget
K-Dense Inc./gget · research
Fast CLI/Python queries to 20+ bioinformatics databases for gene info, BLAST searches, and more.
geopandas
K-Dense Inc./geopandas · data
Python library for working with geospatial vector data including shapefiles, GeoJSON, and GeoPackage files.
fluidsim
K-Dense Inc./fluidsim · code
Framework for computational fluid dynamics simulations using Python, supporting various solvers and high-performance computing.
flowio
K-Dense Inc./flowio · data
Parse FCS files for flow cytometry data preprocessing, extracting events as NumPy arrays and converting to CSV/DataFrame.
datamol
K-Dense Inc./datamol · data
Pythonic wrapper around RDKit for simplified molecular cheminformatics operations.
dask
dask/dask · data
Distributed computing for larger-than-RAM pandas/NumPy workflows, enabling parallel processing and scalability across clusters.
cobrapy
K-Dense Inc./cobrapy · research
COBRApy is a Python library for constraint-based metabolic modeling, essential for systems biology research and metabolic engineering analysis.
bioservices
cokelaer/bioservices · data
Unified Python interface to 40+ bioinformatics services for cross-database analysis and ID mapping.
biopython
biopython/biopython · research
Comprehensive molecular biology toolkit for sequence manipulation, file parsing, phylogenetics, and NCBI/PubMed access.
astropy
astropy/astropy · data
Comprehensive Python library for astronomy and astrophysics, facilitating astronomical data analysis and manipulation.