k-dense▌

### Imaging Data Commons - name: "imaging-data-commons" - description: "Query and download public cancer imaging data from NCI Imaging Data Commons using idc-index. Use for accessing large-scale radiology (CT, MR, PET) and pathology datasets for AI training or research. N..."

### Database Lookup - name: "database-lookup" - description: "Search 78 public scientific, biomedical, materials science, and economic databases via REST APIs. Covers physics/astronomy (NASA, NIST, SDSS, SIMBAD), earth/environment (USGS, NOAA, EPA), chemistry/dr..."

### Hypothesis Generation - name: "hypothesis-generation" - description: "Structured hypothesis formulation from observations. Use when you have experimental observations or data and need to formulate testable hypotheses with predictions, propose mechanisms, and design expe..." - allowed-tools: "Read Write Edit Bash"

### Deeptools - name: "deeptools" - description: "NGS analysis toolkit. BAM to bigWig conversion, QC (correlation, PCA, fingerprints), heatmaps/profiles (TSS, peaks), for ChIP-seq, RNA-seq, ATAC-seq visualization."

### Cirq - name: "cirq" - description: "Google quantum computing framework. Use when targeting Google Quantum AI hardware, designing noise-aware circuits, or running quantum characterization experiments. Best for Google hardware, noise mode..." - allowed-tools: "Read Write Edit Bash"

### Esm - name: "esm" - description: "Comprehensive toolkit for EvolutionaryScale protein language models including ESM3 (generative multimodal design across sequence, structure, and function) and ESM C (efficient embeddings). Use for pro..."

### Hypogenic - name: "hypogenic" - description: "Automated LLM-driven hypothesis generation and testing on tabular datasets. Use when you want to systematically explore hypotheses about patterns in empirical data (e.g., deception detection, content ..."

### Hugging Science - name: "hugging-science" - description: "Use when the user is doing AI/ML work in a scientific domain such as biology, chemistry, physics, astronomy, climate, genomics, materials, medicine, ecology, energy, engineering, math, drug discovery,..."

### Ginkgo Cloud Lab - name: "ginkgo-cloud-lab" - description: "Submit and manage protocols on Ginkgo Bioworks Cloud Lab (cloud.ginkgo.bio), a web-based interface for autonomous lab execution on Reconfigurable Automation Carts (RACs). Use when the user wants to ru..."

### Dask - name: "dask" - description: "Distributed computing for larger-than-RAM pandas/NumPy workflows. Use when you need to scale existing pandas/NumPy code beyond memory or across clusters. Best for parallel file processing, distributed..." - allowed-tools: "Read Write Edit Bash"