genomics▌
6 indexed skills · max 10 per page
gtars
K-Dense Inc./gtars · data
High-performance toolkit for genomic interval analysis in Rust with Python bindings.
gget
K-Dense Inc./gget · research
Fast CLI/Python queries to 20+ bioinformatics databases for gene info, BLAST searches, and more.
geniml
databio/geniml · data
Geniml is a Python package for building machine learning models on genomic interval data from BED files, enabling various genomic analyses.
dnanexus-integration
dnanexus/dx-toolkit · data
DNAnexus cloud genomics platform for app development, data management, and workflow execution.
cellxgene-census
K-Dense Inc./cellxgene-census · data
Query the CELLxGENE Census (61M+ cells) programmatically for expression data across tissues, diseases, or cell types.
anndata
scverse/anndata · data
Data structure for annotated matrices in single-cell analysis, facilitating efficient storage, manipulation, and analysis of large datasets.