data▌
145 indexed skills · max 10 per page
gget
K-Dense Inc./gget · research
Fast CLI/Python queries to 20+ bioinformatics databases for gene info, BLAST searches, and more.
geniml
databio/geniml · data
Geniml is a Python package for building machine learning models on genomic interval data from BED files, enabling various genomic analyses.
flowio
K-Dense Inc./flowio · data
Parse FCS files for flow cytometry data preprocessing, extracting events as NumPy arrays and converting to CSV/DataFrame.
exploratory-data-analysis
K-Dense Inc./exploratory-data-analysis · data
Perform comprehensive exploratory data analysis on scientific data files across 200+ file formats.
dnanexus-integration
dnanexus/dx-toolkit · data
DNAnexus cloud genomics platform for app development, data management, and workflow execution.
depmap
broadinstitute/depmap-portal · research
Query the Cancer Dependency Map for gene dependency scores, drug sensitivity data, and gene effect profiles.
deep-tools
K-Dense Inc./deeptools · data
deepTools is a comprehensive suite of Python command-line tools for processing and analyzing high-throughput sequencing data.
deepchem
K-Dense Inc./deepchem · data
Molecular ML with diverse featurizers and pre-built datasets for property prediction and drug discovery.
datamol
K-Dense Inc./datamol · data
Pythonic wrapper around RDKit for simplified molecular cheminformatics operations.
cellxgene-census
K-Dense Inc./cellxgene-census · data
Query the CELLxGENE Census (61M+ cells) programmatically for expression data across tissues, diseases, or cell types.