research▌

### Histolab - name: "histolab" - description: "Lightweight WSI tile extraction and preprocessing. Use for basic slide processing, tissue detection, tile extraction, and stain normalization for H&E images. Best for simple pipelines, dataset prepara..."

### Citation Management - name: "citation-management" - description: "Comprehensive citation management for academic research. Search Google Scholar and PubMed for papers, extract accurate metadata, validate citations, and generate properly formatted BibTeX entries. Thi..." - allowed-tools: "Read Write Edit Bash"

### Imaging Data Commons - name: "imaging-data-commons" - description: "Query and download public cancer imaging data from NCI Imaging Data Commons using idc-index. Use for accessing large-scale radiology (CT, MR, PET) and pathology datasets for AI training or research. N..."

### Database Lookup - name: "database-lookup" - description: "Search 78 public scientific, biomedical, materials science, and economic databases via REST APIs. Covers physics/astronomy (NASA, NIST, SDSS, SIMBAD), earth/environment (USGS, NOAA, EPA), chemistry/dr..."

### Hypothesis Generation - name: "hypothesis-generation" - description: "Structured hypothesis formulation from observations. Use when you have experimental observations or data and need to formulate testable hypotheses with predictions, propose mechanisms, and design expe..." - allowed-tools: "Read Write Edit Bash"

### Infographics - name: "infographics" - description: "Create professional infographics using Nano Banana Pro AI with smart iterative refinement. Uses Gemini 3 Pro for quality review. Integrates research-lookup and web search for accurate data. Supports 1..." - allowed-tools: "Read Write Edit Bash"

### Esm - name: "esm" - description: "Comprehensive toolkit for EvolutionaryScale protein language models including ESM3 (generative multimodal design across sequence, structure, and function) and ESM C (efficient embeddings). Use for pro..."

### Deeptools - name: "deeptools" - description: "NGS analysis toolkit. BAM to bigWig conversion, QC (correlation, PCA, fingerprints), heatmaps/profiles (TSS, peaks), for ChIP-seq, RNA-seq, ATAC-seq visualization."

### Cirq - name: "cirq" - description: "Google quantum computing framework. Use when targeting Google Quantum AI hardware, designing noise-aware circuits, or running quantum characterization experiments. Best for Google hardware, noise mode..." - allowed-tools: "Read Write Edit Bash"

### Hypogenic - name: "hypogenic" - description: "Automated LLM-driven hypothesis generation and testing on tabular datasets. Use when you want to systematically explore hypotheses about patterns in empirical data (e.g., deception detection, content ..."