bioinformatics▌
15 indexed skills · max 10 per page
latchbio-integration
latchbio/latch · data
Latch platform for bioinformatics workflows. Build pipelines with Latch SDK, @workflow/@task decorators, deploy serverless workflows, LatchFile/LatchDir, Nextflow/Snakemake integration.
gtars
K-Dense Inc./gtars · data
High-performance toolkit for genomic interval analysis in Rust with Python bindings.
glycoengineering
Kuan-lin Huang/glycoengineering · research
Analyze and engineer protein glycosylation for therapeutic antibody optimization and vaccine design.
gget
K-Dense Inc./gget · research
Fast CLI/Python queries to 20+ bioinformatics databases for gene info, BLAST searches, and more.
geniml
databio/geniml · data
Geniml is a Python package for building machine learning models on genomic interval data from BED files, enabling various genomic analyses.
ete-toolkit
K-Dense Inc./ete3 · research
A toolkit for phylogenetic tree manipulation, analysis, and visualization, integrating with biological databases for phylogenomics.
esm
evolutionaryscale/esm · research
Comprehensive toolkit for protein language models including ESM3 and ESM C for protein design and embeddings.
dnanexus-integration
dnanexus/dx-toolkit · data
DNAnexus cloud genomics platform for app development, data management, and workflow execution.
diffdock
gcorso/DiffDock · research
DiffDock is a diffusion-based deep learning tool for predicting protein-ligand binding poses, crucial for structure-based drug discovery.
deep-tools
K-Dense Inc./deeptools · data
deepTools is a comprehensive suite of Python command-line tools for processing and analyzing high-throughput sequencing data.